c26bed28-1ac2-4c07-a18e-c801f3f188c1
https://www.gbif.jp/ipt/resource?r=nies_mcc
Microbial Culture Collection, National Institute for Environmental Studies
Masanobu
Kawachi
National Institute for Environmental Studies
Head of Biodiversity Resource Conservation Section
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2345
kawachi.masanobu@nies.go.jp
Masanobu
Kawachi
National Institute for Environmental Studies
Head of Biodiversity Resource Conservation Section
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2345
kawachi.masanobu@nies.go.jp
Haruyo
Yamaguchi
National Institute for Environmental Studies
Senior Researcher
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2424
yamaguchi.haruyo@nies.go.jp
contentProvider
Miwa
Ishimoto
National Institute for Environmental Studies
Curator
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
ishimoto.miwa@nies.go.jp
contentProvider
Kumiko
Totsu
National Institute for Environmental Studies
Specialist (Database engineer)
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2894
totsu.kumiko@nies.go.jp
programmer
Masanobu
Kawachi
National Institute for Environmental Studies
Head of Biodiversity Resource Conservation Section
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2345
kawachi.masanobu@nies.go.jp
contentProvider
2022-05-16
eng
This dataset provides 1245 occurrence data of algae in the Microbial Culture Collection at the National Institute for Environmental Studies, Japan (NIES Collection) where culture strains of cyanobacteria, eukaryotic microalgae, protozoa and endangered algae are maintained. The NIES Collection can be found at http://mcc.nies.go.jp/localeAction.do?lang=en.
Occurrence
GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml
Specimen
GBIF Dataset Subtype Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_subtype.xml
algae
culture collection
n/a
Occurrence
GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type_2015-07-10.xml
This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.
http://mcc.nies.go.jp/localeAction.do?lang=en
Japan, International waters
123.779
147.147
45.439
24.324
1964-07-30
2018-11-05
genus
Acaryochloris
genus
Achnanthes
genus
Achnanthidium
genus
Actinastrum
genus
Amphidinium
genus
Annamia
genus
Aphanizomenon
genus
Aphanothece
genus
Asterococcus
genus
Asterodinium
genus
Astrephomene
genus
Asulcocephalium
genus
Aulacoseira
genus
Aurearena
genus
Basichlamys
genus
Bathycoccus
genus
Braarudosphaera
genus
Bumilleriopsis
genus
Calcidiscus
genus
Calyptrosphaera
genus
Carolibrandtia
genus
Carteria
genus
Chaetoceros
genus
Chara
genus
Characiochloris
genus
Chattonella
genus
Chlamydomonas
genus
Chlorella
genus
Chlorogonium
genus
Chloromonas
genus
Chloroparvula
genus
Chloropicon
genus
Chlorotetraedron
genus
Chroodactylon
genus
Chroomonas
genus
Chrysochromulina
genus
Closterium
genus
Coccomyxa
genus
Coelastrum
genus
Colemanosphaera
genus
Coleochaete
genus
Coolia
genus
Corisphaera
genus
Corynoplastis
genus
Cosmarium
genus
Craticula
genus
Cruciplacolithus
genus
Cryptoglena
genus
Cryptomonas
genus
Cuspidothrix
genus
Cyanophora
genus
Cyclostephanos
genus
Cyclotella
genus
Dangeardinia
genus
Desmodesmus
genus
Didymogenes
genus
Diphylleia
genus
Dolichospermum
genus
Dysnectes
genus
Echinosphaeridium
genus
Emiliania
genus
Entamoeba
genus
Eremosphaera
genus
Esquamula
genus
Euastrum
genus
Eudorina
genus
Fibrocapsa
genus
Fischerella
genus
Fragilaria
genus
Gambierdiscus
genus
Gephyrocapsa
genus
Gertia
genus
Glaucocystis
genus
Glenodiniopsis
genus
Gloeomonas
genus
Glossomastix
genus
Gonatozygon
genus
Goniomonas
genus
Gonium
genus
Gonyostomum
genus
Gungnir
genus
Gymnoxanthella
genus
Hafniomonas
genus
Hamakko
genus
Hapalochloris
genus
Haptolina
genus
Helicosphaera
genus
Hemidinium
genus
Hemiselmis
genus
Heterocapsa
genus
Heterosigma
genus
Hyalotheca
genus
Hydrococcus
genus
Imantonia
genus
Ixipapillifera
genus
Karenia
genus
Koshicola
genus
Lagerheimia
genus
Leiocephalium
genus
Lepidodinium
genus
Lobomonas
genus
Mataza
genus
Mayamaea
genus
Merotricha
genus
Mesostigma
genus
Messastrum
genus
Micractinium
genus
Micrasterias
genus
Microcystis
genus
Microseira
genus
Monactinus
genus
Monomastix
genus
Monoraphidium
genus
Nannochloris
genus
Nemalionopsis
genus
Neochlorosarcina
genus
Neodesmus
genus
Nephroselmis
genus
Nitella
genus
Nitellopsis
genus
Nitzschia
genus
Nostoc
genus
Ochrosphaera
genus
Olisthodiscus
genus
Oltmannsiellopsis
genus
Oolithotus
genus
Ophiocytium
genus
Ostravamonas
genus
Ostreococcus
genus
Ovaloplaca
genus
Ovulinata
genus
Pandorina
genus
Paraphysomonas
genus
Pascherina
genus
Paulinella
genus
Pavlomulina
genus
Pediastrum
genus
Pediludiella
genus
Pedinomonas
genus
Pelagomonas
genus
Penium
genus
Peridinium
genus
Phaeocystis
genus
Picochlorum
genus
Planktothricoides
genus
Planktothrix
genus
Planothidium
genus
Pleodorina
genus
Prorocentrum
genus
Protosiphon
genus
Prymnesium
genus
Pseudanabaena
genus
Pseudocarteria
genus
Pseudomarvania
genus
Pseudopediastrum
genus
Pseudoschroederia
genus
Pterosperma
genus
Pycnococcus
genus
Pyramimonas
genus
Pyrobotrys
genus
Raphidiophrys
genus
Raphidiopsis
genus
Rhysamphichloris
genus
Rufusiella
genus
Rusalka
genus
Sellaphora
genus
Skeletonema
genus
Sphaerospermopsis
genus
Spinoclosterium
genus
Spirogyra
genus
Staurastrum
genus
Stauridium
genus
Staurodesmus
genus
Staurosirella
genus
Suigetsumonas
genus
Synura
genus
Syracosphaera
genus
Tabris
genus
Tetrabaena
genus
Tetradesmus
genus
Tetraselmis
genus
Tetrastrum
genus
Thalassiosira
genus
Thoracosphaera
genus
Thorea
genus
Trachyrhizium
genus
Trebouxia
genus
Trentepohlia
genus
Treubaria
genus
Triparma
genus
Tsukubamonas
genus
Ulnaria
genus
Umbilicosphaera
genus
Umezakia
genus
Urgorri
genus
Viridiuvalis
genus
Vitreochlamys
genus
Volvox
genus
Volvulina
genus
Yamagishiella
annually
Masanobu
Kawachi
National Institute for Environmental Studies
Head of Biodiversity Resource Conservation Section
16-2 Onogawa
Tsukuba
Ibaraki
305-8506
JP
+8129-850-2345
kawachi.masanobu@nies.go.jp
Biodiversity Division
National Institute for Environmental Studies
biodiv.data@nies.go.jp
Geographic coordinates and uncertainties were measured using gazetteers such as Google Maps and Google Earth 7.1.2.2041 following procedures described in Chapman and Wieczorek (2006). The center of a locality area calculated with ArcGIS 10 was selected as a representative point for localities where exact coordinates were not provided. Geographic data including polygons, lines and points according to the National Land Numerical Information download service (Ministry of Land, Infrastructure, Transport and Tourism, Japan 2005a, 2005b, 2015), Arc GIS data collection 2012 and the literature (Tanaka 2004) were used for calculation. A centroid of a municipality instead of the exact location is used as a generalized locality for endangered algae species. For a municipality consisting of islands, the main island is used to represent the municipality.
Algae strain data were extracted from the Microbial Culture Collection and organized into occurrence data using a MySQL database.
Algae found in Japan from 1964 to 2018.
n/a
Scientific names were validated against AlgaeBase and the GBIF Backbone Taxonomy. Geographic coordinates provided by collectors and depositors or derived from documents of strain deposit requests in the NIES Collection were checked on Google Maps to see whether the coordinates were within the areas of localities.
2015-03-27T11:13:54.917+09:00
dataset
National Institute for Environmental Studies (2022) Microbial Culture Collection, National Institute for Environmental Studies. 1245 records, Contributed by Kawachi M, Yamaguchi H, Ishimoto M, Online:http://www.gbif.jp/ipt/archive.do?r=nies_mcc, under CC BY 4.0, released on 27/01/2022.
Chapman, A.D. and Wieczorek, J. (Eds) (2006) Guide to Best Practices for Georeferencing. Global Biodiversity Information Facility, Copenhagen, 90 pp.
Ministry of Land, Infrastructure, Transport and Tourism, Japan (2005a) National Land Numerical Information Lakes Data, Online:http://nlftp.mlit.go.jp/ksj-e/gml/datalist/KsjTmplt-W09.html, accessed on 16/04/2014.
Ministry of Land, Infrastructure, Transport and Tourism, Japan (2005b) National Land Numerical Information Dam Data, Online: http://nlftp.mlit.go.jp/ksj-e/gml/datalist/KsjTmplt-W01.html, accessed on 16/04/2014.
Ministry of Land, Infrastructure, Transport and Tourism, Japan (2015) National Land Numerical Information Administrative Zones Data, Online: http://nlftp.mlit.go.jp/ksj/gml/datalist/KsjTmpltN03.html, accessed on
13/11/2015.
Tanaka M (2004) Nihon Koshoshi II, the University of Nagoya Press, Nagoya.
c26bed28-1ac2-4c07-a18e-c801f3f188c1/v5.1.xml